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LOC118766504 acetylcholine receptor subunit alpha-like 2 [ Octopus sinensis (East Asian common octopus) ]

Gene ID: 118766504, updated on 28-Dec-2023

Summary

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Gene symbol
LOC118766504
Gene description
acetylcholine receptor subunit alpha-like 2
See related
EnsemblRapid:LOC118766504
Gene type
protein coding
RefSeq status
MODEL
Organism
Octopus sinensis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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Genomic context

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See LOC118766504 in Genome Data Viewer
Location:
chromosome: LG16
Exon count:
1
Annotation release Status Assembly LG Location
101 current ASM634580v1 (GCF_006345805.1) LG16 NC_043012.1 (13469356..13471293, complement)

Linkage Group LG16 - NC_043012.1Genomic Context describing neighboring genes Neighboring gene acetylcholine receptor subunit gamma-like Neighboring gene neuronal acetylcholine receptor subunit alpha-6-like Neighboring gene neuronal acetylcholine receptor subunit alpha-4-like Neighboring gene acetylcholine receptor subunit beta-type unc-29-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_043012.1 Chromosome LG16 Reference ASM634580v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular ligand-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octopus sinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM634580v1 Primary Assembly

Genomic

  1. NC_043012.1 Reference ASM634580v1 Primary Assembly

    Range
    13469356..13471293 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036509890.1 → XP_036365783.1  acetylcholine receptor subunit alpha-like 2

    Related
    XP_036365783.1, XM_036509890.1
    Conserved Domains (2) summary
    TIGR00860
    Location:3 → 267
    LIC; Cation transporter family protein
    cd18989
    Location:44 → 158
    LGIC_ECD_cation; extracellular domain (LBD) of cationic Cys-loop neurotransmitter-gated ion channels
Nucleotide Protein
Heading Accession and Version

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