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TMEM242-DT TMEM242 divergent transcript [ Homo sapiens (human) ]

Gene ID: 118732303, updated on 28-Oct-2024

Summary

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Official Symbol
TMEM242-DTprovided by HGNC
Official Full Name
TMEM242 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55260
See related
AllianceGenome:HGNC:55260
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See TMEM242-DT in Genome Data Viewer
Location:
6q25.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (157323634..157324477)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (158565621..158566464)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (157744666..157745509)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901551 Neighboring gene transmembrane protein 242 Neighboring gene lactate dehydrogenase A like 6F, pseudogene Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:157731297-157731836 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:157731837-157732374 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:157733661-157734653 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:157734654-157735645 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25329 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25330 Neighboring gene uncharacterized LOC105378076 Neighboring gene hydroxysteroid 17-beta dehydrogenase 12 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See Variation Viewer (GRCh37.p13)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187268.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL390955

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    157323634..157324477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    158565621..158566464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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