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aguA agmatine deiminase [ Pseudomonas syringae pv. tomato str. DC3000 ]

Gene ID: 1187080, updated on 10-Oct-2024

Summary

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Gene symbol
aguA
Gene description
agmatine deiminase
Locus tag
PSPTO_RS27885
Gene type
protein coding
Organism
Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
PSPTO5393; PSPTO_5393
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Genomic context

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Sequence:
NC_004578.1 (6123022..6124128, complement)

NC_004578.1Genomic Context describing neighboring genes Neighboring gene OprD family porin Neighboring gene hypothetical protein Neighboring gene N-carbamoylputrescine amidase Neighboring gene aminotransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004578.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of plant agmatine iminohydrolase, the last missing link in polyamine biosynthesis of plants. Janowitz T, et al. FEBS Lett, 2003 Jun 5. PMID 12782327
  2. Identification of the putrescine biosynthetic genes in Pseudomonas aeruginosa and characterization of agmatine deiminase and N-carbamoylputrescine amidohydrolase of the arginine decarboxylase pathway. Nakada Y, et al. Microbiology (Reading), 2003 Mar. PMID 12634339
  3. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
agmatine deiminase
WP_011105465.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004578.1 Reference assembly

    Range
    6123022..6124128 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011105465.1 MULTISPECIES: agmatine deiminase [Pseudomonas syringae group]

    See identical proteins and their annotated locations for WP_011105465.1

    UniProtKB/Swiss-Prot
    Q87UB2
    UniProtKB/TrEMBL
    A0A0N8RZP2, A0A0P9JL20, A0A3M3Z590, A0AAP1F7I0
    Conserved Domains (1) summary
    PRK13551
    Location:4 → 366
    PRK13551; agmatine deiminase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q87UB2.1

Gene LinkOut

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Molecular Biology Databases