U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ATF7IP activating transcription factor 7 interacting protein [ Molothrus ater ]

Gene ID: 118698400, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
ATF7IP
Gene description
activating transcription factor 7 interacting protein
See related
EnsemblRapid:ENSMRTG00000003355
Gene type
protein coding
RefSeq status
MODEL
Organism
Molothrus ater
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Icteridae; Molothrus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ATF7IP in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_03 current BPBGC_Mater_1.1 (GCF_012460135.2) 5 NC_050482.2 (48041646..48123944)
100 previous assembly BPBGC_Mater_1.0 (GCF_012460135.1) 1A NC_050508.1 (48043345..48125644)

Chromosome 5 - NC_050482.2Genomic Context describing neighboring genes Neighboring gene germ cell associated 1 Neighboring gene epithelial membrane protein 1 Neighboring gene glutamate ionotropic receptor NMDA type subunit 2B Neighboring gene phospholipase B domain containing 1 Neighboring gene guanylate cyclase 2C

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA integration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA methylation-dependent heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
activating transcription factor 7-interacting protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_012460135.2-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BPBGC_Mater_1.1 Primary Assembly

Genomic

  1. NC_050482.2 Reference BPBGC_Mater_1.1 Primary Assembly

    Range
    48041646..48123944
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036401652.2 → XP_036257545.1  activating transcription factor 7-interacting protein 1 isoform X5

    Conserved Domains (3) summary
    COG5271
    Location:53 → 261
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam16788
    Location:392 → 593
    ATF7IP_BD; ATF-interacting protein binding domain
    cl00213
    Location:778 → 916
    DNA_BRE_C; DNA breaking-rejoining enzymes, C-terminal catalytic domain

  2. XM_036401645.2 → XP_036257538.1  activating transcription factor 7-interacting protein 1 isoform X1

    Conserved Domains (4) summary
    COG5271
    Location:53 → 261
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam05109
    Location:507 → 777
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam16788
    Location:392 → 603
    ATF7IP_BD; ATF-interacting protein binding domain
    cl00213
    Location:950 → 1088
    DNA_BRE_C; DNA breaking-rejoining enzymes, C-terminal catalytic domain

  3. XM_036401644.2 → XP_036257537.1  activating transcription factor 7-interacting protein 1 isoform X1

    Related
    ENSMRTP00000004597.1
    Conserved Domains (4) summary
    COG5271
    Location:53 → 261
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam05109
    Location:507 → 777
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam16788
    Location:392 → 603
    ATF7IP_BD; ATF-interacting protein binding domain
    cl00213
    Location:950 → 1088
    DNA_BRE_C; DNA breaking-rejoining enzymes, C-terminal catalytic domain

  4. XM_036401648.2 → XP_036257541.1  activating transcription factor 7-interacting protein 1 isoform X2

    Conserved Domains (4) summary
    COG5271
    Location:53 → 261
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam05109
    Location:507 → 777
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam16788
    Location:392 → 603
    ATF7IP_BD; ATF-interacting protein binding domain
    cl00213
    Location:949 → 1087
    DNA_BRE_C; DNA breaking-rejoining enzymes, C-terminal catalytic domain

  5. XM_036401649.2 → XP_036257542.1  activating transcription factor 7-interacting protein 1 isoform X3

    Conserved Domains (4) summary
    PHA03247
    Location:649 → 1016
    PHA03247; large tegument protein UL36; Provisional
    COG5271
    Location:53 → 261
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam16788
    Location:392 → 603
    ATF7IP_BD; ATF-interacting protein binding domain
    pfam16794
    Location:998 → 1098
    fn3_4; Fibronectin-III type domain

  6. XM_036401650.2 → XP_036257543.1  activating transcription factor 7-interacting protein 1 isoform X4

    Related
    ENSMRTP00000004580.1
    Conserved Domains (4) summary
    PHA03247
    Location:649 → 1015
    PHA03247; large tegument protein UL36; Provisional
    COG5271
    Location:53 → 261
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam16788
    Location:392 → 603
    ATF7IP_BD; ATF-interacting protein binding domain
    pfam16794
    Location:997 → 1097
    fn3_4; Fibronectin-III type domain

  7. XM_054515021.1 → XP_054370996.1  activating transcription factor 7-interacting protein 1 isoform X1

  8. XM_036401646.2 → XP_036257539.1  activating transcription factor 7-interacting protein 1 isoform X1

    Conserved Domains (4) summary
    COG5271
    Location:53 → 261
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam05109
    Location:507 → 777
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam16788
    Location:392 → 603
    ATF7IP_BD; ATF-interacting protein binding domain
    cl00213
    Location:950 → 1088
    DNA_BRE_C; DNA breaking-rejoining enzymes, C-terminal catalytic domain

  9. XM_036401647.2 → XP_036257540.1  activating transcription factor 7-interacting protein 1 isoform X1

    Conserved Domains (4) summary
    COG5271
    Location:53 → 261
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam05109
    Location:507 → 777
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam16788
    Location:392 → 603
    ATF7IP_BD; ATF-interacting protein binding domain
    cl00213
    Location:950 → 1088
    DNA_BRE_C; DNA breaking-rejoining enzymes, C-terminal catalytic domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.