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CHRNA3 cholinergic receptor nicotinic alpha 3 subunit [ Myotis myotis ]

Gene ID: 118679126, updated on 30-Mar-2024

Summary

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Gene symbol
CHRNA3
Gene description
cholinergic receptor nicotinic alpha 3 subunit
Locus tag
mMyoMyo1_002834
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis myotis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See CHRNA3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current mMyoMyo1.p (GCF_014108235.1) Unplaced Scaffold NW_023416327.1 (1360334..1373593, complement)

NW_023416327.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene cholinergic receptor nicotinic alpha 5 subunit Neighboring gene cholinergic receptor nicotinic beta 4 subunit Neighboring gene ubiquitin conjugating enzyme E2 Q2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023416327 Unplaced Scaffold Reference mMyoMyo1.p Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuronal acetylcholine receptor subunit alpha-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis myotis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMyoMyo1.p Primary Assembly

Genomic

  1. NW_023416327.1 Reference mMyoMyo1.p Primary Assembly

    Range
    1360334..1373593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036355512.1 → XP_036211405.1  neuronal acetylcholine receptor subunit alpha-3

    UniProtKB/TrEMBL
    A0A7J7RSQ0
    Conserved Domains (2) summary
    TIGR00860
    Location:25 → 498
    LIC; Cation transporter family protein
    cd19016
    Location:28 → 234
    LGIC_ECD_nAChR_A3; extracellular domain of nicotinic acetylcholine receptor subunit alpha 3 (CHRNA3)

  2. XM_036355510.1 → XP_036211403.1  neuronal acetylcholine receptor subunit alpha-3

    UniProtKB/TrEMBL
    A0A7J7RSQ0
    Conserved Domains (2) summary
    TIGR00860
    Location:25 → 498
    LIC; Cation transporter family protein
    cd19016
    Location:28 → 234
    LGIC_ECD_nAChR_A3; extracellular domain of nicotinic acetylcholine receptor subunit alpha 3 (CHRNA3)
Nucleotide Protein
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