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PSPTO_RS25935 polysaccharide lyase family 7 protein [ Pseudomonas syringae pv. tomato str. DC3000 ]

Gene ID: 1186700, updated on 10-Oct-2024

Summary

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Gene symbol
PSPTO_RS25935
Gene description
polysaccharide lyase family 7 protein
Locus tag
PSPTO_RS25935
Gene type
protein coding
Organism
Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
PSPTO5015; PSPTO_5015
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Genomic context

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Sequence:
NC_004578.1 (5701382..5702053)

NC_004578.1Genomic Context describing neighboring genes Neighboring gene M48 family metallopeptidase Neighboring gene EAL domain-containing protein Neighboring gene sodium/proline symporter PutP Neighboring gene trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004578.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
polysaccharide lyase family 7 protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004578.1 Reference assembly

    Range
    5701382..5702053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005762942.1 MULTISPECIES: polysaccharide lyase family 7 protein [Pseudomonas syringae group]

    See identical proteins and their annotated locations for WP_005762942.1

    UniProtKB/TrEMBL
    A0A0N0WHU9, A0A3M3Z6G5, A0A3M4U441, A0AAP1XEU0, A0AAQ0SLV1, Q87VC4
    Conserved Domains (1) summary
    pfam08787
    Location:2 → 220
    Alginate_lyase2; Alginate lyase
Nucleotide Protein
Heading Accession and Version