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LPIN1 lipin 1 [ Myotis myotis ]

Gene ID: 118669270, updated on 30-Mar-2024

Summary

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Gene symbol
LPIN1
Gene description
lipin 1
Locus tag
mMyoMyo1_012414
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis myotis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See LPIN1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
100 current mMyoMyo1.p (GCF_014108235.1) Unplaced Scaffold NW_023416318.1 (52618842..52695745, complement)

NW_023416318.1Genomic Context describing neighboring genes Neighboring gene tribbles pseudokinase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene growth regulating estrogen receptor binding 1 Neighboring gene E2F transcription factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023416318 Unplaced Scaffold Reference mMyoMyo1.p Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis myotis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMyoMyo1.p Primary Assembly

Genomic

  1. NW_023416318.1 Reference mMyoMyo1.p Primary Assembly

    Range
    52618842..52695745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036335308.1 → XP_036191201.1  phosphatidate phosphatase LPIN1 isoform X4

    Conserved Domains (3) summary
    pfam04571
    Location:52 → 158
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:677 → 902
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:515 → 606
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  2. XM_036335304.1 → XP_036191197.1  phosphatidate phosphatase LPIN1 isoform X2

    UniProtKB/TrEMBL
    A0A7J7U5I9
    Conserved Domains (3) summary
    pfam04571
    Location:52 → 158
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:712 → 937
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:550 → 641
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  3. XM_036335303.1 → XP_036191196.1  phosphatidate phosphatase LPIN1 isoform X1

    UniProtKB/TrEMBL
    A0A7J7U5J6
    Conserved Domains (3) summary
    pfam04571
    Location:52 → 158
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:713 → 938
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:551 → 642
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  4. XM_036335306.1 → XP_036191199.1  phosphatidate phosphatase LPIN1 isoform X3

    Conserved Domains (3) summary
    pfam04571
    Location:21 → 127
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:682 → 907
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:520 → 611
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  5. XM_036335307.1 → XP_036191200.1  phosphatidate phosphatase LPIN1 isoform X3

    Conserved Domains (3) summary
    pfam04571
    Location:21 → 127
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:682 → 907
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:520 → 611
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  6. XM_036335309.1 → XP_036191202.1  phosphatidate phosphatase LPIN1 isoform X5

    UniProtKB/TrEMBL
    A0A7J7U5N7
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:662 → 887
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:500 → 591
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  7. XM_036335310.1 → XP_036191203.1  phosphatidate phosphatase LPIN1 isoform X5

    UniProtKB/TrEMBL
    A0A7J7U5N7
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:662 → 887
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:500 → 591
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

RNA

  1. XR_004971936.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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