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RFT1 RFT1 homolog [ Myotis myotis ]

Gene ID: 118667984, updated on 30-Mar-2024

Summary

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Gene symbol
RFT1
Gene description
RFT1 homolog
Locus tag
mMyoMyo1_016492
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis myotis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See RFT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current mMyoMyo1.p (GCF_014108235.1) Unplaced Scaffold NW_023416317.1 (17866374..17898696)

NW_023416317.1Genomic Context describing neighboring genes Neighboring gene transketolase Neighboring gene protein kinase C delta Neighboring gene uncharacterized LOC118667872 Neighboring gene Scm like with four mbt domains 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023416317 Unplaced Scaffold Reference mMyoMyo1.p Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein RFT1 homolog
Names
RFT1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis myotis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMyoMyo1.p Primary Assembly

Genomic

  1. NW_023416317.1 Reference mMyoMyo1.p Primary Assembly

    Range
    17866374..17898696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036331914.1 → XP_036187807.1  protein RFT1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A7J7UEB4
    Conserved Domains (1) summary
    pfam04506
    Location:14 → 524
    Rft-1; Rft protein

  2. XM_036331917.1 → XP_036187810.1  protein RFT1 homolog isoform X4

    Conserved Domains (1) summary
    cl09326
    Location:76 → 510
    MATE_like; Multidrug and toxic compound extrusion family and similar proteins

  3. XM_036331920.1 → XP_036187813.1  protein RFT1 homolog isoform X7

    Conserved Domains (1) summary
    cl09326
    Location:61 → 432
    MATE_like; Multidrug and toxic compound extrusion family and similar proteins

  4. XM_036331919.1 → XP_036187812.1  protein RFT1 homolog isoform X6

    Conserved Domains (1) summary
    cl09326
    Location:42 → 454
    MATE_like; Multidrug and toxic compound extrusion family and similar proteins

  5. XM_036331915.1 → XP_036187808.1  protein RFT1 homolog isoform X3

    Conserved Domains (1) summary
    cl09326
    Location:42 → 512
    MATE_like; Multidrug and toxic compound extrusion family and similar proteins

  6. XM_036331913.1 → XP_036187806.1  protein RFT1 homolog isoform X1

    Conserved Domains (1) summary
    pfam04506
    Location:42 → 546
    Rft-1; Rft protein

  7. XM_036331918.1 → XP_036187811.1  protein RFT1 homolog isoform X5

    Conserved Domains (1) summary
    cl09326
    Location:36 → 470
    MATE_like; Multidrug and toxic compound extrusion family and similar proteins
Nucleotide Protein
Heading Accession and Version

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