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CLEC5A C-type lectin domain containing 5A [ Myotis myotis ]

Gene ID: 118666330, updated on 30-Mar-2024

Summary

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Gene symbol
CLEC5A
Gene description
C-type lectin domain containing 5A
Locus tag
mMyoMyo1_002972
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis myotis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See CLEC5A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current mMyoMyo1.p (GCF_014108235.1) Unplaced Scaffold NW_023416315.1 (52502956..52514807)

NW_023416315.1Genomic Context describing neighboring genes Neighboring gene maltase-glucoamylase Neighboring gene U6 spliceosomal RNA Neighboring gene taste 2 receptor member 38 Neighboring gene putative olfactory receptor 9A1 Neighboring gene probable inactive serine protease 58

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023416315 Unplaced Scaffold Reference mMyoMyo1.p Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables virus receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 5 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis myotis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMyoMyo1.p Primary Assembly

Genomic

  1. NW_023416315.1 Reference mMyoMyo1.p Primary Assembly

    Range
    52502956..52514807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036328509.1 → XP_036184402.1  C-type lectin domain family 5 member A isoform X3

    Conserved Domains (1) summary
    cd03593
    Location:49 → 163
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_036328507.1 → XP_036184400.1  C-type lectin domain family 5 member A isoform X1

    UniProtKB/TrEMBL
    A0A7J7V2K3
    Conserved Domains (1) summary
    cd03593
    Location:69 → 183
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_036328508.1 → XP_036184401.1  C-type lectin domain family 5 member A isoform X2

    UniProtKB/TrEMBL
    A0A7J7V285
    Conserved Domains (1) summary
    cd03593
    Location:49 → 163
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
Heading Accession and Version

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