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SGCD sarcoglycan delta [ Myotis myotis ]

Gene ID: 118658083, updated on 30-Mar-2024

Summary

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Gene symbol
SGCD
Gene description
sarcoglycan delta
Locus tag
mMyoMyo1_017367
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis myotis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See SGCD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current mMyoMyo1.p (GCF_014108235.1) Unplaced Scaffold NW_023416368.1 (16503253..16819957, complement)

NW_023416368.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA57 Neighboring gene hepatitis A virus cellular receptor 1 Neighboring gene T cell immunoglobulin and mucin domain containing 4 Neighboring gene dynein light chain 1, cytoplasmic-like Neighboring gene succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023416368 Unplaced Scaffold Reference mMyoMyo1.p Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis myotis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMyoMyo1.p Primary Assembly

Genomic

  1. NW_023416368.1 Reference mMyoMyo1.p Primary Assembly

    Range
    16503253..16819957 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036313037.1 → XP_036168930.1  delta-sarcoglycan

    UniProtKB/TrEMBL
    A0A7J7XK43, A0A7J7XKM8
    Conserved Domains (1) summary
    pfam04790
    Location:23 → 276
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_036313036.1 → XP_036168929.1  delta-sarcoglycan

    UniProtKB/TrEMBL
    A0A7J7XK43, A0A7J7XKM8
    Conserved Domains (1) summary
    pfam04790
    Location:23 → 276
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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