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MTMR1 myotubularin related protein 1 [ Myotis myotis ]

Gene ID: 118653641, updated on 30-Mar-2024

Summary

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Gene symbol
MTMR1
Gene description
myotubularin related protein 1
Locus tag
mMyoMyo1_013456
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis myotis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See MTMR1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current mMyoMyo1.p (GCF_014108235.1) Unplaced Scaffold NW_023416346.1 (14920371..14988878, complement)

NW_023416346.1Genomic Context describing neighboring genes Neighboring gene high mobility group box 3 Neighboring gene CD99 molecule like 2 Neighboring gene uncharacterized LOC118653643 Neighboring gene U6 spliceosomal RNA Neighboring gene MKI67 FHA domain-interacting nucleolar phosphoprotein-like Neighboring gene myotubularin 1 Neighboring gene heat shock transcription factor, X-linked member 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023416346 Unplaced Scaffold Reference mMyoMyo1.p Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis myotis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMyoMyo1.p Primary Assembly

Genomic

  1. NW_023416346.1 Reference mMyoMyo1.p Primary Assembly

    Range
    14920371..14988878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036304267.1 → XP_036160160.1  myotubularin-related protein 1 isoform X6

    Conserved Domains (2) summary
    cd13358
    Location:140 → 239
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:256 → 513
    Myotub-related; Myotubularin-like phosphatase domain

  2. XM_036304264.1 → XP_036160157.1  myotubularin-related protein 1 isoform X5

    Conserved Domains (2) summary
    pfam06602
    Location:220 → 546
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:140 → 203
    PH-like; Pleckstrin homology-like domain

  3. XM_036304262.1 → XP_036160155.1  myotubularin-related protein 1 isoform X3

    Conserved Domains (2) summary
    cd13358
    Location:114 → 213
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:230 → 556
    Myotub-related; Myotubularin-like phosphatase domain

  4. XM_036304261.1 → XP_036160154.1  myotubularin-related protein 1 isoform X2

    Conserved Domains (2) summary
    cd13358
    Location:123 → 222
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:239 → 565
    Myotub-related; Myotubularin-like phosphatase domain

  5. XM_036304260.1 → XP_036160153.1  myotubularin-related protein 1 isoform X1

    Conserved Domains (2) summary
    cd13358
    Location:140 → 239
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:256 → 582
    Myotub-related; Myotubularin-like phosphatase domain

  6. XM_036304259.1 → XP_036160152.1  myotubularin-related protein 1 isoform X1

    Conserved Domains (2) summary
    cd13358
    Location:140 → 239
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:256 → 582
    Myotub-related; Myotubularin-like phosphatase domain

  7. XM_036304263.1 → XP_036160156.1  myotubularin-related protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A7J7YFT4
    Conserved Domains (2) summary
    cd13358
    Location:106 → 205
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:222 → 548
    Myotub-related; Myotubularin-like phosphatase domain

  8. XM_036304268.1 → XP_036160161.1  myotubularin-related protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A7J7YEK7
    Conserved Domains (2) summary
    cd13358
    Location:13 → 112
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:129 → 455
    Myotub-related; Myotubularin-like phosphatase domain

  9. XM_036304269.1 → XP_036160162.1  myotubularin-related protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A7J7YEK7
    Conserved Domains (2) summary
    cd13358
    Location:13 → 112
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:129 → 455
    Myotub-related; Myotubularin-like phosphatase domain
Nucleotide Protein
Heading Accession and Version

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