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CHID1 chitinase domain containing 1 [ Molossus molossus (Pallas's mastiff bat) ]

Gene ID: 118643178, updated on 30-Mar-2024

Summary

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Gene symbol
CHID1
Gene description
chitinase domain containing 1
Locus tag
HJG59_002817
Gene type
protein coding
RefSeq status
MODEL
Organism
Molossus molossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus
Orthologs
human mouse all
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Genomic context

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See CHID1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current mMolMol1.p (GCF_014108415.1) Unplaced Scaffold NW_023425368.1 (1837552..1853446)

NW_023425368.1Genomic Context describing neighboring genes Neighboring gene mucin 6, oligomeric mucus/gel-forming Neighboring gene adaptor related protein complex 2 subunit alpha 2 Neighboring gene tetraspanin 4 Neighboring gene RNA polymerase II, I and III subunit L

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023425368 Unplaced Scaffold Reference mMolMol1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oligosaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitinase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Molossus molossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMolMol1.p

Genomic

  1. NW_023425368.1 Reference mMolMol1.p

    Range
    1837552..1853446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036281121.1 → XP_036137014.1  chitinase domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A7J8BIB1, A0A7J8BJ46
    Conserved Domains (1) summary
    cd02876
    Location:80 → 396
    GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...

  2. XM_036281123.1 → XP_036137016.1  chitinase domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A7J8BHT5, A0A7J8BIB2
    Conserved Domains (1) summary
    cd02876
    Location:80 → 362
    GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...

  3. XM_036281124.1 → XP_036137017.1  chitinase domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A7J8BIB2
    Conserved Domains (1) summary
    cd02876
    Location:80 → 331
    GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...

  4. XM_036281118.1 → XP_036137011.1  chitinase domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A7J8BIB1, A0A7J8BJ46
    Conserved Domains (1) summary
    cd02876
    Location:80 → 396
    GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...

  5. XM_036281119.1 → XP_036137012.1  chitinase domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A7J8BIB1, A0A7J8BJ46
    Conserved Domains (1) summary
    cd02876
    Location:80 → 396
    GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...

  6. XM_036281120.1 → XP_036137013.1  chitinase domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A7J8BIB1, A0A7J8BJ46
    Conserved Domains (1) summary
    cd02876
    Location:80 → 396
    GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
Nucleotide Protein
Heading Accession and Version

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