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CNGA1 cyclic nucleotide gated channel subunit alpha 1 [ Molossus molossus (Pallas's mastiff bat) ]

Gene ID: 118640526, updated on 11-Apr-2024

Summary

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Gene symbol
CNGA1
Gene description
cyclic nucleotide gated channel subunit alpha 1
Locus tag
HJG59_003060
Gene type
protein coding
RefSeq status
MODEL
Organism
Molossus molossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus
Orthologs
human mouse all
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Genomic context

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See CNGA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current mMolMol1.p (GCF_014108415.1) Unplaced Scaffold NW_023425344.1 (34962181..35000539, complement)

NW_023425344.1Genomic Context describing neighboring genes Neighboring gene corin, serine peptidase Neighboring gene nuclear transcription factor, X-box binding like 1 Neighboring gene NIPA like domain containing 1 Neighboring gene TXK tyrosine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023425344 Unplaced Scaffold Reference mMolMol1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cGMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intracellularly cAMP-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intracellularly cGMP-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-containing complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic cation transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of intracellular cyclic nucleotide activated cation channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cGMP-gated cation channel alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Molossus molossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMolMol1.p

Genomic

  1. NW_023425344.1 Reference mMolMol1.p

    Range
    34962181..35000539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036277422.1 → XP_036133315.1  cGMP-gated cation channel alpha-1

    UniProtKB/TrEMBL
    A0A7J8JRT1
    Conserved Domains (3) summary
    cd00038
    Location:477 → 588
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00520
    Location:163 → 405
    Ion_trans; Ion transport protein
    pfam16526
    Location:593 → 662
    CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels
Nucleotide Protein
Heading Accession and Version

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