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VCAM1 vascular cell adhesion molecule 1 [ Molossus molossus (Pallas's mastiff bat) ]

Gene ID: 118637380, updated on 30-Mar-2024

Summary

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Gene symbol
VCAM1
Gene description
vascular cell adhesion molecule 1
Locus tag
HJG59_019355
Gene type
protein coding
RefSeq status
MODEL
Organism
Molossus molossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus
Orthologs
human mouse all
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Genomic context

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See VCAM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current mMolMol1.p (GCF_014108415.1) Unplaced Scaffold NW_023425356.1 (4720465..4738671)

NW_023425356.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 14A Neighboring gene G protein-coupled receptor 88 Neighboring gene exostosin like glycosyltransferase 2 Neighboring gene solute carrier family 30 member 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023425356 Unplaced Scaffold Reference mMolMol1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vascular cell adhesion protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Molossus molossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMolMol1.p

Genomic

  1. NW_023425356.1 Reference mMolMol1.p

    Range
    4720465..4738671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036272786.1 → XP_036128679.1  vascular cell adhesion protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A7J8CUW7, A0A7J8CV29
    Conserved Domains (4) summary
    smart00408
    Location:524 → 584
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:229 → 306
    IG; Immunoglobulin
    cd00096
    Location:403 → 409
    Ig; Ig strand A [structural motif]
    cl11960
    Location:402 → 502
    Ig; Immunoglobulin domain

  2. XM_036272787.1 → XP_036128680.1  vascular cell adhesion protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A7J8CUW7
    Conserved Domains (3) summary
    smart00409
    Location:229 → 306
    IG; Immunoglobulin
    cd00096
    Location:403 → 409
    Ig; Ig strand A [structural motif]
    cl11960
    Location:402 → 502
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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