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UBXN2B UBX domain protein 2B [ Molossus molossus (Pallas's mastiff bat) ]

Gene ID: 118631745, updated on 30-Mar-2024

Summary

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Gene symbol
UBXN2B
Gene description
UBX domain protein 2B
Locus tag
HJG59_019155
Gene type
protein coding
RefSeq status
MODEL
Organism
Molossus molossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus
Orthologs
human mouse all
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Genomic context

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See UBXN2B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current mMolMol1.p (GCF_014108415.1) Unplaced Scaffold NW_023425351.1 (15927517..15956512)

NW_023425351.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 110 member B Neighboring gene U1 spliceosomal RNA Neighboring gene cytochrome P450 7A1 Neighboring gene syndecan binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023425351 Unplaced Scaffold Reference mMolMol1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Molossus molossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMolMol1.p

Genomic

  1. NW_023425351.1 Reference mMolMol1.p

    Range
    15927517..15956512
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036264312.1 → XP_036120205.1  UBX domain-containing protein 2B isoform X4

    Conserved Domains (1) summary
    pfam08059
    Location:145 → 177
    SEP; SEP domain

  2. XM_036264309.1 → XP_036120202.1  UBX domain-containing protein 2B isoform X1

    UniProtKB/TrEMBL
    A0A7J8DVF2
    Conserved Domains (2) summary
    smart00553
    Location:139 → 231
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cl28922
    Location:249 → 330
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  3. XM_036264311.1 → XP_036120204.1  UBX domain-containing protein 2B isoform X3

    Conserved Domains (2) summary
    smart00553
    Location:117 → 209
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cl28922
    Location:227 → 308
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  4. XM_036264310.1 → XP_036120203.1  UBX domain-containing protein 2B isoform X2

    Conserved Domains (2) summary
    smart00553
    Location:121 → 213
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cl28922
    Location:231 → 312
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
Nucleotide Protein
Heading Accession and Version

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