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TLR6 toll like receptor 6 [ Molossus molossus (Pallas's mastiff bat) ]

Gene ID: 118626267, updated on 30-Mar-2024

Summary

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Gene symbol
TLR6
Gene description
toll like receptor 6
Locus tag
HJG59_018211
Gene type
protein coding
RefSeq status
MODEL
Organism
Molossus molossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus
Orthologs
human mouse all
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Genomic context

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See TLR6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current mMolMol1.p (GCF_014108415.1) Unplaced Scaffold NW_023425344.1 (27908391..27920363, complement)

NW_023425344.1Genomic Context describing neighboring genes Neighboring gene KLF transcription factor 3 Neighboring gene toll-like receptor 10 Neighboring gene family with sequence similarity 114 member A1 Neighboring gene E3 ubiquitin-protein ligase KCMF1-like Neighboring gene transmembrane protein 156 Neighboring gene kelch like family member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023425344 Unplaced Scaffold Reference mMolMol1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Toll-like receptor 2 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipopeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to diacyl bacterial lipopeptide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Toll-like receptor 2-Toll-like receptor 6 protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Molossus molossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMolMol1.p

Genomic

  1. NW_023425344.1 Reference mMolMol1.p

    Range
    27908391..27920363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036255676.1 → XP_036111569.1  toll-like receptor 6

    UniProtKB/TrEMBL
    A0A7J8K364
    Conserved Domains (6) summary
    smart00082
    Location:529 → 582
    LRRCT; Leucine rich repeat C-terminal domain
    smart00255
    Location:641 → 784
    TIR; Toll - interleukin 1 - resistance
    PLN00113
    Location:12 → 494
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00031
    Location:54 → 77
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:356 → 378
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:76 → 133
    LRR_8; Leucine rich repeat

  2. XM_036255667.1 → XP_036111560.1  toll-like receptor 6

    UniProtKB/TrEMBL
    A0A7J8K364
    Conserved Domains (6) summary
    smart00082
    Location:529 → 582
    LRRCT; Leucine rich repeat C-terminal domain
    smart00255
    Location:641 → 784
    TIR; Toll - interleukin 1 - resistance
    PLN00113
    Location:12 → 494
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00031
    Location:54 → 77
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:356 → 378
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:76 → 133
    LRR_8; Leucine rich repeat

  3. XM_036255687.1 → XP_036111580.1  toll-like receptor 6

    UniProtKB/TrEMBL
    A0A7J8K364
    Conserved Domains (6) summary
    smart00082
    Location:529 → 582
    LRRCT; Leucine rich repeat C-terminal domain
    smart00255
    Location:641 → 784
    TIR; Toll - interleukin 1 - resistance
    PLN00113
    Location:12 → 494
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00031
    Location:54 → 77
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:356 → 378
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:76 → 133
    LRR_8; Leucine rich repeat

  4. XM_036255697.1 → XP_036111590.1  toll-like receptor 6

    UniProtKB/TrEMBL
    A0A7J8K364
    Conserved Domains (6) summary
    smart00082
    Location:529 → 582
    LRRCT; Leucine rich repeat C-terminal domain
    smart00255
    Location:641 → 784
    TIR; Toll - interleukin 1 - resistance
    PLN00113
    Location:12 → 494
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00031
    Location:54 → 77
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:356 → 378
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:76 → 133
    LRR_8; Leucine rich repeat
Nucleotide Protein
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