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Gm53890 predicted gene, 53890 [ Mus musculus (house mouse) ]

Gene ID: 118568194, updated on 8-Feb-2024

Summary

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Official Symbol
Gm53890provided by MGI
Official Full Name
predicted gene, 53890provided by MGI
Primary source
MGI:MGI:6722815
See related
AllianceGenome:MGI:6722815
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See Gm53890 in Genome Data Viewer
Location:
15 D1; 15
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (61956837..61971374, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_38814 Neighboring gene STARR-seq mESC enhancer starr_38815 Neighboring gene origin of replication upstream of Myc Neighboring gene STARR-seq mESC enhancer starr_38818 Neighboring gene STARR-seq mESC enhancer starr_38819 Neighboring gene predicted gene, 18788 Neighboring gene STARR-seq mESC enhancer starr_38820 Neighboring gene myelocytomatosis oncogene Neighboring gene STARR-seq mESC enhancer starr_38824 Neighboring gene Pvt1 oncogene Neighboring gene STARR-positive B cell enhancer ABC_E5482 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:62001280-62001493 Neighboring gene STARR-positive B cell enhancer ABC_E7373 Neighboring gene STARR-positive B cell enhancer mm9_chr15:62013150-62013450 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:62044000-62044201 Neighboring gene macroH2A.3 histone Neighboring gene STARR-seq mESC enhancer starr_38830 Neighboring gene STARR-positive B cell enhancer mm9_chr15:62189952-62190252 Neighboring gene STARR-seq mESC enhancer starr_38831 Neighboring gene STARR-seq mESC enhancer starr_38832 Neighboring gene STARR-seq mESC enhancer starr_38833 Neighboring gene STARR-seq mESC enhancer starr_38834 Neighboring gene predicted gene, 41333

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000081.7 Chromosome 15 Reference GRCm39 C57BL/6J

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    61956837..61971374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004938956.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version