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PSPTO_RS20525 glycoside hydrolase family 28 protein [ Pseudomonas syringae pv. tomato str. DC3000 ]

Gene ID: 1185635, updated on 8-Aug-2024

Summary

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Gene symbol
PSPTO_RS20525
Gene description
glycoside hydrolase family 28 protein
Locus tag
PSPTO_RS20525
Gene type
protein coding
Organism
Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
PSPTO3960; PSPTO_3960
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Genomic context

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Sequence:
NC_004578.1 (4468247..4469845)

NC_004578.1Genomic Context describing neighboring genes Neighboring gene M48 family metalloprotease Neighboring gene quinolinate synthase NadA Neighboring gene IS5-like element ISPssy family transposase Neighboring gene pseudo Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004578.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
glycoside hydrolase family 28 protein
WP_011104804.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004578.1 Reference assembly

    Range
    4468247..4469845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011104804.1 glycoside hydrolase family 28 protein [Pseudomonas syringae group genomosp. 3]

    See identical proteins and their annotated locations for WP_011104804.1

    UniProtKB/TrEMBL
    A0A3M4TFH1, Q87Y49
    Conserved Domains (2) summary
    COG5434
    Location:40 → 528
    Pgu1; Polygalacturonase [Carbohydrate transport and metabolism]
    cl19188
    Location:217 → 432
    PL-6; Polysaccharide Lyase Family 6
Nucleotide Protein
Heading Accession and Version