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RUFY2 RUN and FYVE domain containing 2 [ Halichoerus grypus (gray seal) ]

Gene ID: 118549451, updated on 20-Mar-2024

Summary

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Gene symbol
RUFY2
Gene description
RUN and FYVE domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Halichoerus grypus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Halichoerus
Orthologs
human mouse all
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Genomic context

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See RUFY2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Tufts_HGry_1.1 (GCF_012393455.1) Unplaced Scaffold NW_023400085.1 (1003281..1049501)

NW_023400085.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 16 Neighboring gene uncharacterized LOC118549449 Neighboring gene DNA replication helicase/nuclease 2 Neighboring gene uncharacterized LOC118549453 Neighboring gene heterogeneous nuclear ribonucleoprotein H3 Neighboring gene uncharacterized LOC118549456 Neighboring gene phenazine biosynthesis like protein domain containing

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023400085 Unplaced Scaffold Reference Tufts_HGry_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RUN and FYVE domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Halichoerus grypus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tufts_HGry_1.1

Genomic

  1. NW_023400085.1 Reference Tufts_HGry_1.1

    Range
    1003281..1049501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036113849.1 → XP_035969742.1  RUN and FYVE domain-containing protein 2 isoform X6

    Conserved Domains (3) summary
    COG1196
    Location:230 → 536
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15759
    Location:534 → 604
    FYVE_RUFY2; FYVE domain found in RUN and FYVE domain-containing protein 2 (RUFY2) and similar proteins
    pfam02759
    Location:45 → 166
    RUN; RUN domain

  2. XM_036113852.1 → XP_035969745.1  RUN and FYVE domain-containing protein 2 isoform X9

    Conserved Domains (2) summary
    COG1196
    Location:248 → 442
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl02689
    Location:112 → 199
    RUN; RUN domain

  3. XM_036113851.1 → XP_035969744.1  RUN and FYVE domain-containing protein 2 isoform X8

    Conserved Domains (2) summary
    COG1196
    Location:282 → 476
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:112 → 233
    RUN; RUN domain

  4. XM_036113847.1 → XP_035969740.1  RUN and FYVE domain-containing protein 2 isoform X4

    Conserved Domains (3) summary
    TIGR04523
    Location:251 → 544
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    cd15759
    Location:545 → 615
    FYVE_RUFY2; FYVE domain found in RUN and FYVE domain-containing protein 2 (RUFY2) and similar proteins
    pfam02759
    Location:112 → 233
    RUN; RUN domain

  5. XM_036113846.1 → XP_035969739.1  RUN and FYVE domain-containing protein 2 isoform X3

    Conserved Domains (3) summary
    COG1196
    Location:243 → 569
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15759
    Location:567 → 637
    FYVE_RUFY2; FYVE domain found in RUN and FYVE domain-containing protein 2 (RUFY2) and similar proteins
    cl02689
    Location:112 → 199
    RUN; RUN domain

  6. XM_036113844.1 → XP_035969737.1  RUN and FYVE domain-containing protein 2 isoform X2

    Conserved Domains (3) summary
    COG1196
    Location:277 → 602
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15759
    Location:600 → 670
    FYVE_RUFY2; FYVE domain found in RUN and FYVE domain-containing protein 2 (RUFY2) and similar proteins
    pfam02759
    Location:112 → 233
    RUN; RUN domain

  7. XM_036113843.1 → XP_035969736.1  RUN and FYVE domain-containing protein 2 isoform X1

    Conserved Domains (3) summary
    COG1196
    Location:277 → 603
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15759
    Location:601 → 671
    FYVE_RUFY2; FYVE domain found in RUN and FYVE domain-containing protein 2 (RUFY2) and similar proteins
    pfam02759
    Location:112 → 233
    RUN; RUN domain

  8. XM_036113850.1 → XP_035969743.1  RUN and FYVE domain-containing protein 2 isoform X7

    Conserved Domains (3) summary
    COG1196
    Location:214 → 520
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15759
    Location:518 → 588
    FYVE_RUFY2; FYVE domain found in RUN and FYVE domain-containing protein 2 (RUFY2) and similar proteins
    pfam02759
    Location:29 → 150
    RUN; RUN domain

  9. XM_036113848.1 → XP_035969741.1  RUN and FYVE domain-containing protein 2 isoform X5

    Conserved Domains (3) summary
    COG1196
    Location:232 → 538
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15759
    Location:536 → 606
    FYVE_RUFY2; FYVE domain found in RUN and FYVE domain-containing protein 2 (RUFY2) and similar proteins
    pfam02759
    Location:47 → 168
    RUN; RUN domain

RNA

  1. XR_004924098.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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