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GAPT GRB2 binding adaptor protein, transmembrane [ Halichoerus grypus (gray seal) ]

Gene ID: 118546053, updated on 20-Mar-2024

Summary

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Gene symbol
GAPT
Gene description
GRB2 binding adaptor protein, transmembrane
Gene type
protein coding
RefSeq status
MODEL
Organism
Halichoerus grypus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Halichoerus
Orthologs
human mouse all
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Genomic context

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See GAPT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Tufts_HGry_1.1 (GCF_012393455.1) Unplaced Scaffold NW_023399554.1 (274027..280958, complement)

NW_023399554.1Genomic Context describing neighboring genes Neighboring gene ras-related protein Rab-3C Neighboring gene uncharacterized LOC118546056 Neighboring gene polo like kinase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023399554 Unplaced Scaffold Reference Tufts_HGry_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein GAPT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Halichoerus grypus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tufts_HGry_1.1

Genomic

  1. NW_023399554.1 Reference Tufts_HGry_1.1

    Range
    274027..280958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036108690.1 → XP_035964583.1  protein GAPT isoform X2

    Conserved Domains (1) summary
    pfam11770
    Location:132 → 285
    GAPT; GRB2-binding adapter (GAPT)

  2. XM_036108689.1 → XP_035964582.1  protein GAPT isoform X2

    Conserved Domains (1) summary
    pfam11770
    Location:132 → 285
    GAPT; GRB2-binding adapter (GAPT)

  3. XM_036108684.1 → XP_035964577.1  protein GAPT isoform X1

    Conserved Domains (1) summary
    pfam11770
    Location:150 → 303
    GAPT; GRB2-binding adapter (GAPT)

  4. XM_036108687.1 → XP_035964580.1  protein GAPT isoform X2

    Conserved Domains (1) summary
    pfam11770
    Location:132 → 285
    GAPT; GRB2-binding adapter (GAPT)

  5. XM_036108686.1 → XP_035964579.1  protein GAPT isoform X1

    Conserved Domains (1) summary
    pfam11770
    Location:150 → 303
    GAPT; GRB2-binding adapter (GAPT)

  6. XM_036108685.1 → XP_035964578.1  protein GAPT isoform X1

    Conserved Domains (1) summary
    pfam11770
    Location:150 → 303
    GAPT; GRB2-binding adapter (GAPT)

  7. XM_036108683.1 → XP_035964576.1  protein GAPT isoform X1

    Conserved Domains (1) summary
    pfam11770
    Location:150 → 303
    GAPT; GRB2-binding adapter (GAPT)

  8. XM_036108688.1 → XP_035964581.1  protein GAPT isoform X2

    Conserved Domains (1) summary
    pfam11770
    Location:132 → 285
    GAPT; GRB2-binding adapter (GAPT)

  9. XM_036108691.1 → XP_035964584.1  protein GAPT isoform X2

    Conserved Domains (1) summary
    pfam11770
    Location:132 → 285
    GAPT; GRB2-binding adapter (GAPT)
Nucleotide Protein
Heading Accession and Version

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