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LOC118509744 delta-sarcoglycan [ Anopheles stephensi (Asian malaria mosquito) ]

Gene ID: 118509744, updated on 10-May-2024

Summary

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Gene symbol
LOC118509744
Gene description
delta-sarcoglycan
See related
VectorBase:ASTEI20_032327
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles stephensi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Orthologs
fruit fly all
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Genomic context

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See LOC118509744 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Annotation release Status Assembly Chr Location
100 current UCI_ANSTEP_V1.0 (GCF_013141755.1) X NC_050201.1 (14383331..14394845, complement)

Chromosome X - NC_050201.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118509735 Neighboring gene serine/threonine-protein kinase D3 Neighboring gene uncharacterized LOC118509755 Neighboring gene proton channel OtopLc-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_050201.1 Chromosome X Reference UCI_ANSTEP_V1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anopheles stephensi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_ANSTEP_V1.0

Genomic

  1. NC_050201.1 Reference UCI_ANSTEP_V1.0

    Range
    14383331..14394845 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036050878.1 → XP_035906771.1  delta-sarcoglycan

    Conserved Domains (1) summary
    pfam04790
    Location:245 → 513
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases