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LOC118432514 alpha-(1,3)-fucosyltransferase 7-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118432514, updated on 14-Dec-2023

Summary

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Gene symbol
LOC118432514
Gene description
alpha-(1,3)-fucosyltransferase 7-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118432514 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 15 NC_049993.1 (14669264..14671944, complement)

Chromosome 15 - NC_049993.1Genomic Context describing neighboring genes Neighboring gene CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like Neighboring gene neuralized-like protein 4 Neighboring gene zinc finger protein 845-like Neighboring gene 3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049993.1 Chromosome 15 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle. Yue JX, et al. Genome Biol Evol, 2016 Aug 25. PMID 27412606, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049993.1 Reference Bfl_VNyyK Primary Assembly

    Range
    14669264..14671944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035844123.1 → XP_035700016.1  alpha-(1,3)-fucosyltransferase 7-like

    UniProtKB/TrEMBL
    A0A9J7MI20
    Conserved Domains (2) summary
    pfam00852
    Location:240 → 414
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:102 → 210
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein Strain
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