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LOC118432263 uncharacterized LOC118432263 [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118432263, updated on 26-Jun-2024

Summary

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Gene symbol
LOC118432263
Gene description
uncharacterized LOC118432263
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118432263 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
35
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 15 NC_049993.1 (6718546..6748099)

Chromosome 15 - NC_049993.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118432048 Neighboring gene KN motif and ankyrin repeat domain-containing protein 1-like Neighboring gene uncharacterized LOC118432264 Neighboring gene uncharacterized LOC118432265

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049993.1 Chromosome 15 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle. Yue JX, et al. Genome Biol Evol, 2016 Aug 25. PMID 27412606, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC118432263

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049993.1 Reference Bfl_VNyyK Primary Assembly

    Range
    6718546..6748099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035843798.1 → XP_035699691.1  uncharacterized protein LOC118432263

    UniProtKB/TrEMBL
    A0A9J7NDN3
    Conserved Domains (5) summary
    smart00454
    Location:1665 → 1736
    SAM; Sterile alpha motif
    cd00057
    Location:734 → 878
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    pfam02140
    Location:1180 → 1255
    Gal_Lectin; Galactose binding lectin domain
    cl11394
    Location:884 → 1044
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl15755
    Location:1594 → 1661
    SAM_superfamily; SAM (Sterile alpha motif )
Nucleotide Protein Strain
Heading Accession and Version

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