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LOC118427544 p53-induced death domain-containing protein 1-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118427544, updated on 14-Dec-2023

Summary

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Gene symbol
LOC118427544
Gene description
p53-induced death domain-containing protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118427544 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 12 NC_049990.1 (15159332..15162987, complement)

Chromosome 12 - NC_049990.1Genomic Context describing neighboring genes Neighboring gene type I inositol polyphosphate 5-phosphatase 12-like Neighboring gene copine family protein 1-like Neighboring gene histone H2B-like Neighboring gene late histone H2A.L3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049990.1 Chromosome 12 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables caspase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables death receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in TRAIL-activated apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of extrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CD95 death-inducing signaling complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
p53-induced death domain-containing protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049990.1 Reference Bfl_VNyyK Primary Assembly

    Range
    15159332..15162987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035837381.1 → XP_035693274.1  p53-induced death domain-containing protein 1-like

    UniProtKB/TrEMBL
    A0A9J7N7T0
    Conserved Domains (2) summary
    cd01670
    Location:446 → 520
    Death; Death Domain: a protein-protein interaction domain
    cl02517
    Location:3 → 49
    ZU5; ZU5 domain
Nucleotide Protein Strain
Heading Accession and Version

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