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LOC118427213 beta-1,3-galactosyltransferase 1-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118427213, updated on 14-Dec-2023

Summary

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Gene symbol
LOC118427213
Gene description
beta-1,3-galactosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118427213 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 12 NC_049990.1 (3664940..3669743)

Chromosome 12 - NC_049990.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118427211 Neighboring gene uncharacterized LOC118428016 Neighboring gene cullin-3-A-like Neighboring gene uncharacterized LOC118427214 Neighboring gene beta-1,3-galactosyltransferase 1-like Neighboring gene neuronal acetylcholine receptor subunit alpha-6-like Neighboring gene peroxynitrite isomerase THAP4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049990.1 Chromosome 12 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049990.1 Reference Bfl_VNyyK Primary Assembly

    Range
    3664940..3669743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035836853.1 → XP_035692746.1  beta-1,3-galactosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A9J7N7Q2, C3ZDY4
    Conserved Domains (1) summary
    cl21608
    Location:84 → 279
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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