U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC118426016 Golgi SNAP receptor complex member 1-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118426016, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC118426016
Gene description
Golgi SNAP receptor complex member 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC118426016 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 11 NC_049989.1 (9808583..9810192)

Chromosome 11 - NC_049989.1Genomic Context describing neighboring genes Neighboring gene complement component 1 Q subcomponent-binding protein, mitochondrial-like Neighboring gene histone H3-like centromeric protein cnp1 Neighboring gene mediator of RNA polymerase II transcription subunit 19-like Neighboring gene inactive peptidyl-prolyl cis-trans isomerase FKBP6-like Neighboring gene XK-related protein 9-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_049989.1 Chromosome 11 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi medial cisterna IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cis-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Golgi SNAP receptor complex member 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049989.1 Reference Bfl_VNyyK Primary Assembly

    Range
    9808583..9810192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035835232.1 → XP_035691125.1  Golgi SNAP receptor complex member 1-like

    UniProtKB/TrEMBL
    C3Z9D6
    Conserved Domains (1) summary
    cd15864
    Location:95 → 160
    SNARE_GS28; SNARE motif of GS28
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.