U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC118424696 galactosylceramide sulfotransferase-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118424696, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC118424696
Gene description
galactosylceramide sulfotransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC118424696 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 10 NC_049988.1 (4958033..4967962, complement)

Chromosome 10 - NC_049988.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118424286 Neighboring gene uncharacterized LOC118424697 Neighboring gene uncharacterized LOC118424703 Neighboring gene galactosylceramide sulfotransferase-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_049988.1 Chromosome 10 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
galactosylceramide sulfotransferase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049988.1 Reference Bfl_VNyyK Primary Assembly

    Range
    4958033..4967962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035833376.1 → XP_035689269.1  galactosylceramide sulfotransferase-like

    UniProtKB/TrEMBL
    A0A9J7N4F3
    Conserved Domains (1) summary
    cl22970
    Location:75 → 349
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases