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LOC118423091 GPI mannosyltransferase 2-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118423091, updated on 14-Dec-2023

Summary

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Gene symbol
LOC118423091
Gene description
GPI mannosyltransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118423091 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 9 NC_049987.1 (7796736..7799781, complement)

Chromosome 9 - NC_049987.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118423080 Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene CNK3/IPCEF1 fusion protein-like Neighboring gene transcriptional adapter 3-A-like Neighboring gene uncharacterized LOC118423106 Neighboring gene alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049987.1 Chromosome 9 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle. Yue JX, et al. Genome Biol Evol, 2016 Aug 25. PMID 27412606, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049987.1 Reference Bfl_VNyyK Primary Assembly

    Range
    7796736..7799781 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035831072.1 → XP_035686965.1  GPI mannosyltransferase 2-like isoform X1

    UniProtKB/TrEMBL
    A0A9J7LTG3, C3XTG5
    Conserved Domains (1) summary
    cl21590
    Location:7 → 490
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_035831074.1 → XP_035686967.1  GPI mannosyltransferase 2-like isoform X2

    UniProtKB/TrEMBL
    A0A9J7LQ53, C3XTG5
    Conserved Domains (1) summary
    cl21590
    Location:6 → 467
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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