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LOC118420794 torsin-1A-interacting protein 1-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118420794, updated on 14-Dec-2023

Summary

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Gene symbol
LOC118420794
Gene description
torsin-1A-interacting protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118420794 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 8 NC_049986.1 (21020705..21022505, complement)

Chromosome 8 - NC_049986.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118420795 Neighboring gene phytanoyl-CoA dioxygenase, peroxisomal-like Neighboring gene uncharacterized LOC118420791 Neighboring gene matrilin-2-like Neighboring gene gastrula zinc finger protein XlCGF57.1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049986.1 Chromosome 8 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049986.1 Reference Bfl_VNyyK Primary Assembly

    Range
    21020705..21022505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035827788.1 → XP_035683681.1  torsin-1A-interacting protein 1-like

    UniProtKB/TrEMBL
    A0A9J7LIP5
    Conserved Domains (1) summary
    pfam05609
    Location:1 → 174
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein Strain
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