U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC118420479 galactose-3-O-sulfotransferase 4-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118420479, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC118420479
Gene description
galactose-3-O-sulfotransferase 4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC118420479 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 8 NC_049986.1 (836060..847856, complement)

Chromosome 8 - NC_049986.1Genomic Context describing neighboring genes Neighboring gene mediator of RNA polymerase II transcription subunit 22-like Neighboring gene retinal dehydrogenase 2-like Neighboring gene galactose-3-O-sulfotransferase 2-like Neighboring gene galactose-3-O-sulfotransferase 2-like Neighboring gene galactose-3-O-sulfotransferase 2-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_049986.1 Chromosome 8 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
galactose-3-O-sulfotransferase 4-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049986.1 Reference Bfl_VNyyK Primary Assembly

    Range
    836060..847856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035827305.1 → XP_035683198.1  galactose-3-O-sulfotransferase 4-like

    UniProtKB/TrEMBL
    A0A9J7LK20
    Conserved Domains (1) summary
    cl22970
    Location:92 → 370
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases