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LOC118420462 galactose-3-O-sulfotransferase 2-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118420462, updated on 14-Dec-2023

Summary

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Gene symbol
LOC118420462
Gene description
galactose-3-O-sulfotransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118420462 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 8 NC_049986.1 (849064..861606, complement)

Chromosome 8 - NC_049986.1Genomic Context describing neighboring genes Neighboring gene retinal dehydrogenase 2-like Neighboring gene galactose-3-O-sulfotransferase 4-like Neighboring gene galactose-3-O-sulfotransferase 2-like Neighboring gene galactose-3-O-sulfotransferase 2-like Neighboring gene uncharacterized LOC118420450

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049986.1 Chromosome 8 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose-3-O-sulfotransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049986.1 Reference Bfl_VNyyK Primary Assembly

    Range
    849064..861606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035827280.1 → XP_035683173.1  galactose-3-O-sulfotransferase 2-like

    UniProtKB/TrEMBL
    C3ZG64
    Conserved Domains (1) summary
    cl22970
    Location:106 → 387
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

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