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LOC118403805 galactose-3-O-sulfotransferase 2-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118403805, updated on 14-Dec-2023

Summary

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Gene symbol
LOC118403805
Gene description
galactose-3-O-sulfotransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118403805 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 16 NC_049994.1 (84303..102119, complement)

Chromosome 16 - NC_049994.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 37A-like Neighboring gene galactose-3-O-sulfotransferase 3-like Neighboring gene ubiquitin carboxyl-terminal hydrolase 23-like Neighboring gene translation initiation factor IF-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049994.1 Chromosome 16 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle. Yue JX, et al. Genome Biol Evol, 2016 Aug 25. PMID 27412606, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose-3-O-sulfotransferase 2-like; galactose-3-O-sulfotransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049994.1 Reference Bfl_VNyyK Primary Assembly

    Range
    84303..102119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035802605.1 → XP_035658498.1  galactose-3-O-sulfotransferase 3-like isoform X2

    UniProtKB/TrEMBL
    A0A9J7KGZ4
    Conserved Domains (1) summary
    cl22970
    Location:49 → 333
    Sulfotransfer_2; Sulfotransferase family

  2. XM_035802609.1 → XP_035658502.1  galactose-3-O-sulfotransferase 3-like isoform X3

    UniProtKB/TrEMBL
    A0A9J7HJQ4
    Conserved Domains (1) summary
    cl22970
    Location:2 → 282
    Sulfotransfer_2; Sulfotransferase family

  3. XM_035802610.1 → XP_035658503.1  galactose-3-O-sulfotransferase 2-like isoform X4

    UniProtKB/TrEMBL
    A0A9J7HFT8
    Conserved Domains (1) summary
    cl22970
    Location:137 → 238
    Sulfotransfer_2; Sulfotransferase family

  4. XM_035802604.1 → XP_035658497.1  galactose-3-O-sulfotransferase 2-like isoform X1

    UniProtKB/TrEMBL
    A0A9J7HF41
    Conserved Domains (1) summary
    cl22970
    Location:49 → 352
    Sulfotransfer_2; Sulfotransferase family

  5. XM_035802603.1 → XP_035658496.1  galactose-3-O-sulfotransferase 2-like isoform X1

    UniProtKB/TrEMBL
    A0A9J7HF41
    Conserved Domains (1) summary
    cl22970
    Location:49 → 352
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

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