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LOC118403141 tax1-binding protein 1 homolog [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118403141, updated on 5-Jul-2023

Summary

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Gene symbol
LOC118403141
Gene description
tax1-binding protein 1 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118403141 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 16 NC_049994.1 (11483041..11519939, complement)

Chromosome 16 - NC_049994.1Genomic Context describing neighboring genes Neighboring gene tripartite motif-containing protein 3-like Neighboring gene muscle M-line assembly protein unc-89-like Neighboring gene ubiquitin-conjugating enzyme E2 Z-like Neighboring gene probable basic-leucine zipper transcription factor D

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049994.1 Chromosome 16 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle. Yue JX, et al. Genome Biol Evol, 2016 Aug 25. PMID 27412606, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
tax1-binding protein 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049994.1 Reference Bfl_VNyyK Primary Assembly

    Range
    11483041..11519939 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035801646.1 → XP_035657539.1  tax1-binding protein 1 homolog

    UniProtKB/TrEMBL
    A0A9J7HGL5
    Conserved Domains (4) summary
    COG1196
    Location:154 → 526
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam17751
    Location:32 → 135
    SKICH; SKICH domain
    pfam18112
    Location:1060 → 1086
    Zn-C2H2_12; Autophagy receptor zinc finger-C2H2 domain
    cl41777
    Location:1034 → 1057
    Zn-C2H2_CALCOCO1_TAX1BP1_like; autophagy receptor zinc finger-C2H2 domain found in calcium-binding and coiled-coil domain-containing proteins, TAX1BP1 and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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