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chst6 carbohydrate sulfotransferase 6 [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118401333, updated on 20-Mar-2024

Summary

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Gene symbol
chst6
Gene description
carbohydrate sulfotransferase 6
See related
EnsemblRapid:ENSOKEG00005014793
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
zebrafish all
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Genomic context

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See chst6 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 22 NC_068442.1 (31390627..31413453, complement)

Chromosome 22 - NC_068442.1Genomic Context describing neighboring genes Neighboring gene syntrophin, beta 2 Neighboring gene spire-type actin nucleation factor 2 Neighboring gene transmembrane protein 231 Neighboring gene GABA(A) receptor-associated protein like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068442.1 Chromosome 22 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfur compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068442.1 Reference Oket_V2 Primary Assembly

    Range
    31390627..31413453 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035798743.2 → XP_035654636.1  carbohydrate sulfotransferase 6

    Conserved Domains (1) summary
    pfam13469
    Location:45 → 297
    Sulfotransfer_3; Sulfotransferase family

  2. XM_035798744.2 → XP_035654637.1  carbohydrate sulfotransferase 6

    Related
    ENSOKEP00005025441.1, ENSOKET00005029287.1
    Conserved Domains (1) summary
    pfam13469
    Location:45 → 297
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

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