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LOC118400045 trithorax group protein osa-like [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118400045, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118400045
Gene description
trithorax group protein osa-like
See related
EnsemblRapid:ENSOKEG00005033491
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC118400045 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 2 NC_068422.1 (36857523..36987401, complement)

Chromosome 2 - NC_068422.1Genomic Context describing neighboring genes Neighboring gene abraxas 2, BRISC complex subunit Neighboring gene ubiquitin thioesterase Zranb1-like Neighboring gene erythroid differentiation-related factor 1-like Neighboring gene testis expressed 36

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068422.1 Chromosome 2 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trithorax group protein osa-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068422.1 Reference Oket_V2 Primary Assembly

    Range
    36857523..36987401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035796420.2 → XP_035652313.1  trithorax group protein osa-like

    Conserved Domains (2) summary
    PHA03247
    Location:105 → 535
    PHA03247; large tegument protein UL36; Provisional
    cd05299
    Location:672 → 990
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

RNA

  1. XR_004828955.2 RNA Sequence

  2. XR_008076862.1 RNA Sequence

    Related
    ENSOKET00005066666.1

  3. XR_004828956.2 RNA Sequence

  4. XR_004828952.2 RNA Sequence

    Related
    ENSOKET00005066674.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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