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slc25a20 solute carrier family 25 member 20 [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118388868, updated on 20-Mar-2024

Summary

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Gene symbol
slc25a20
Gene description
solute carrier family 25 member 20
See related
EnsemblRapid:ENSOKEG00005005162
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See slc25a20 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 10 NC_068430.1 (46499881..46506138, complement)

Chromosome 10 - NC_068430.1Genomic Context describing neighboring genes Neighboring gene msx2-interacting protein Neighboring gene protein kinase, cAMP-dependent, regulatory, type II, alpha, B Neighboring gene NCK-interacting protein with SH3 domain-like Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068430.1 Chromosome 10 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068430.1 Reference Oket_V2 Primary Assembly

    Range
    46499881..46506138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035778413.2 → XP_035634306.1  mitochondrial carnitine/acylcarnitine carrier protein

    Related
    ENSOKEP00005009392.1, ENSOKET00005010408.1
    Conserved Domains (1) summary
    pfam00153
    Location:105 → 197
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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