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med23 mediator complex subunit 23 [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118386847, updated on 20-Mar-2024

Summary

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Gene symbol
med23
Gene description
mediator complex subunit 23
See related
EnsemblRapid:ENSOKEG00005044058
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See med23 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 8 NC_068428.1 (14888024..14918533, complement)

Chromosome 8 - NC_068428.1Genomic Context describing neighboring genes Neighboring gene protein 4.1-like Neighboring gene uncharacterized LOC127931346 Neighboring gene A-kinase anchor protein 7 Neighboring gene interleukin 20 receptor, alpha Neighboring gene solute carrier family 35 member D3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068428.1 Chromosome 8 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068428.1 Reference Oket_V2 Primary Assembly

    Range
    14888024..14918533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035774768.2 → XP_035630661.1  mediator of RNA polymerase II transcription subunit 23 isoform X2

    Related
    ENSOKEP00005078549.1, ENSOKET00005094022.1
    Conserved Domains (1) summary
    pfam11573
    Location:5 → 1311
    Med23; Mediator complex subunit 23

  2. XM_035774766.2 → XP_035630659.1  mediator of RNA polymerase II transcription subunit 23 isoform X1

    Related
    ENSOKEP00005078551.1, ENSOKET00005094024.1
    Conserved Domains (1) summary
    pfam11573
    Location:5 → 1315
    Med23; Mediator complex subunit 23

  3. XM_035774769.2 → XP_035630662.1  mediator of RNA polymerase II transcription subunit 23 isoform X3

    Related
    ENSOKEP00005078458.1, ENSOKET00005093829.1
    Conserved Domains (1) summary
    pfam11573
    Location:5 → 1285
    Med23; Mediator complex subunit 23
Nucleotide Protein Strain
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