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LOC118382690 laminin subunit alpha-1 [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118382690, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118382690
Gene description
laminin subunit alpha-1
See related
EnsemblRapid:ENSOKEG00005018950
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
lama1
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Genomic context

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See LOC118382690 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
54
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 4 NC_068424.1 (22113696..22166879)

Chromosome 4 - NC_068424.1Genomic Context describing neighboring genes Neighboring gene GTP-binding protein Rheb Neighboring gene receptor-type tyrosine-protein phosphatase mu Neighboring gene small nucleolar RNA SNORA29 Neighboring gene uncharacterized LOC127920213 Neighboring gene rho GTPase-activating protein 18-like Neighboring gene lethal(3)malignant brain tumor-like protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068424.1 Chromosome 4 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in blood vessel morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in camera-type eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: laminin subunit alpha-1
Names
laminin, alpha 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068424.1 Reference Oket_V2 Primary Assembly

    Range
    22113696..22166879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052503978.1 → XP_052359938.1  LOW QUALITY PROTEIN: laminin subunit alpha-1

    Related
    ENSOKEP00005031478.1, ENSOKET00005037370.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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