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ano5a anoctamin 5a [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118377185, updated on 20-Mar-2024

Summary

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Gene symbol
ano5a
Gene description
anoctamin 5a
See related
EnsemblRapid:ENSOKEG00005047863
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See ano5a in Genome Data Viewer
Location:
chromosome: 26
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 26 NC_068446.1 (42517417..42629374, complement)

Chromosome 26 - NC_068446.1Genomic Context describing neighboring genes Neighboring gene vesicular glutamate transporter 2.1-like Neighboring gene uncharacterized LOC127912128 Neighboring gene uncharacterized LOC127912129 Neighboring gene uncharacterized LOC127912130 Neighboring gene uncharacterized LOC127912131 Neighboring gene uncharacterized LOC127912210 Neighboring gene anoctamin-9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068446.1 Chromosome 26 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068446.1 Reference Oket_V2 Primary Assembly

    Range
    42517417..42629374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052480948.1 → XP_052336908.1  anoctamin-5 isoform X2

    Related
    ENSOKEP00005089968.1, ENSOKET00005106958.1

  2. XM_052480947.1 → XP_052336907.1  anoctamin-5 isoform X1

  3. XM_052480949.1 → XP_052336909.1  anoctamin-5 isoform X3

    Related
    ENSOKEP00005089973.1, ENSOKET00005106963.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases