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alg9 ALG9 alpha-1,2-mannosyltransferase [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118375822, updated on 20-Mar-2024

Summary

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Gene symbol
alg9
Gene description
ALG9 alpha-1,2-mannosyltransferase
See related
EnsemblRapid:ENSOKEG00005036324
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See alg9 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 11 NC_068431.1 (3751894..3830987, complement)

Chromosome 11 - NC_068431.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127933009 Neighboring gene dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial Neighboring gene uncharacterized LOC127933010 Neighboring gene uncharacterized LOC127933011 Neighboring gene uncharacterized LOC127933015 Neighboring gene uncharacterized LOC127933014 Neighboring gene melanoma-derived growth regulatory protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068431.1 Chromosome 11 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,2-mannosyltransferase ALG9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068431.1 Reference Oket_V2 Primary Assembly

    Range
    3751894..3830987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052529170.1 → XP_052385130.1  alpha-1,2-mannosyltransferase ALG9 isoform X2

  2. XM_052529177.1 → XP_052385137.1  alpha-1,2-mannosyltransferase ALG9 isoform X8

  3. XM_052529169.1 → XP_052385129.1  alpha-1,2-mannosyltransferase ALG9 isoform X1

  4. XM_052529175.1 → XP_052385135.1  alpha-1,2-mannosyltransferase ALG9 isoform X7

  5. XM_052529178.1 → XP_052385138.1  alpha-1,2-mannosyltransferase ALG9 isoform X9

    Related
    ENSOKEP00005060040.1, ENSOKET00005072937.1

  6. XM_052529179.1 → XP_052385139.1  alpha-1,2-mannosyltransferase ALG9 isoform X10

  7. XM_052529180.1 → XP_052385140.1  alpha-1,2-mannosyltransferase ALG9 isoform X11

  8. XM_052529181.1 → XP_052385141.1  alpha-1,2-mannosyltransferase ALG9 isoform X12

  9. XM_052529182.1 → XP_052385142.1  alpha-1,2-mannosyltransferase ALG9 isoform X13

  10. XM_052529185.1 → XP_052385145.1  alpha-1,2-mannosyltransferase ALG9 isoform X16

  11. XM_052529173.1 → XP_052385133.1  alpha-1,2-mannosyltransferase ALG9 isoform X5

  12. XM_052529184.1 → XP_052385144.1  alpha-1,2-mannosyltransferase ALG9 isoform X15

  13. XM_052529172.1 → XP_052385132.1  alpha-1,2-mannosyltransferase ALG9 isoform X4

  14. XM_052529183.1 → XP_052385143.1  alpha-1,2-mannosyltransferase ALG9 isoform X14

  15. XM_052529174.1 → XP_052385134.1  alpha-1,2-mannosyltransferase ALG9 isoform X6

  16. XM_052529187.1 → XP_052385147.1  alpha-1,2-mannosyltransferase ALG9 isoform X18

  17. XM_052529171.1 → XP_052385131.1  alpha-1,2-mannosyltransferase ALG9 isoform X3

  18. XM_052529186.1 → XP_052385146.1  alpha-1,2-mannosyltransferase ALG9 isoform X17

  19. XM_052529190.1 → XP_052385150.1  alpha-1,2-mannosyltransferase ALG9 isoform X20

  20. XM_052529176.1 → XP_052385136.1  alpha-1,2-mannosyltransferase ALG9 isoform X7

  21. XM_052529189.1 → XP_052385149.1  alpha-1,2-mannosyltransferase ALG9 isoform X19

    Related
    ENSOKEP00005060037.1, ENSOKET00005072934.1

RNA

  1. XR_008146753.1 RNA Sequence

  2. XR_008146751.1 RNA Sequence

  3. XR_008146752.1 RNA Sequence

  4. XR_008146758.1 RNA Sequence

  5. XR_008146757.1 RNA Sequence

  6. XR_008146756.1 RNA Sequence

  7. XR_008146755.1 RNA Sequence

  8. XR_008146754.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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