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LOC118374432 torsin-1A-interacting protein 2-like [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118374432, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118374432
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSOKEG00005050145
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC118374432 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 1 NC_068421.1 (91365331..91391730)

Chromosome 1 - NC_068421.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118374433 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene olfactomedin-like 2Ba Neighboring gene uncharacterized LOC127908215 Neighboring gene uncharacterized LOC127915924

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068421.1 Chromosome 1 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068421.1 Reference Oket_V2 Primary Assembly

    Range
    91365331..91391730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052465550.1 → XP_052321510.1  torsin-1A-interacting protein 2-like

    Related
    ENSOKEP00005092051.1, ENSOKET00005109572.1
Nucleotide Protein Strain
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Molecular Biology Databases