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LOC118374427 torsin-1A-interacting protein 2-like [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118374427, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118374427
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSOKEG00005050142
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 1 NC_068421.1 (91360475..91365266, complement)

Chromosome 1 - NC_068421.1Genomic Context describing neighboring genes Neighboring gene unconventional SNARE in the ER 1 homolog (S. cerevisiae) Neighboring gene uncharacterized LOC118374433 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene olfactomedin-like 2Ba Neighboring gene uncharacterized LOC127908215

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068421.1 Chromosome 1 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068421.1 Reference Oket_V2 Primary Assembly

    Range
    91360475..91365266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035760843.2 → XP_035616736.1  torsin-1A-interacting protein 2-like isoform X2

    Related
    ENSOKEP00005092044.1, ENSOKET00005109565.1
    Conserved Domains (1) summary
    pfam05609
    Location:323 → 528
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_035760842.2 → XP_035616735.1  torsin-1A-interacting protein 2-like isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:324 → 529
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein Strain
Heading Accession and Version

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