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LOC118370383 C-terminal-binding protein 1-like [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118370383, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118370383
Gene description
C-terminal-binding protein 1-like
See related
EnsemblRapid:ENSOKEG00005028078
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC118370383 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 12 NC_068432.1 (394406..404256, complement)

Chromosome 12 - NC_068432.1Genomic Context describing neighboring genes Neighboring gene early growth response protein 1-like Neighboring gene uncharacterized LOC118370372 Neighboring gene protein FAM53C-like Neighboring gene lymphocyte cytosolic protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068432.1 Chromosome 12 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068432.1 Reference Oket_V2 Primary Assembly

    Range
    394406..404256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035755352.2 → XP_035611245.1  C-terminal-binding protein 1-like isoform X1

    Related
    ENSOKEP00005045545.1, ENSOKET00005055386.1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_035755353.2 → XP_035611246.1  C-terminal-binding protein 1-like isoform X1

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_035755354.2 → XP_035611247.1  C-terminal-binding protein 1-like isoform X1

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_035755355.2 → XP_035611248.1  C-terminal-binding protein 1-like isoform X1

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_052457577.1 → XP_052313537.1  C-terminal-binding protein 1-like isoform X2

    Related
    ENSOKEP00005045542.1, ENSOKET00005055383.1

  6. XM_035755357.2 → XP_035611250.1  C-terminal-binding protein 1-like isoform X2

    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein Strain
Heading Accession and Version

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