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fut8a fucosyltransferase 8a (alpha (1,6) fucosyltransferase) [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118369050, updated on 20-Mar-2024

Summary

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Gene symbol
fut8a
Gene description
fucosyltransferase 8a (alpha (1,6) fucosyltransferase)
See related
EnsemblRapid:ENSOKEG00005035192
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
zebrafish all
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Genomic context

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See fut8a in Genome Data Viewer
Location:
chromosome: 35
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 35 NC_068455.1 (15374888..15545825)

Chromosome 35 - NC_068455.1Genomic Context describing neighboring genes Neighboring gene tubulin epsilon and delta complex 1 Neighboring gene dynein, axonemal, light chain 1 Neighboring gene uncharacterized LOC127915884 Neighboring gene gephyrin a Neighboring gene protein associated with LIN7 1, MAGUK p55 family member a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068455.1 Chromosome 35 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein 6-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,6)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068455.1 Reference Oket_V2 Primary Assembly

    Range
    15374888..15545825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052496633.1 → XP_052352593.1  alpha-(1,6)-fucosyltransferase

    Related
    ENSOKEP00005057756.1, ENSOKET00005070396.1

RNA

  1. XR_008092736.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases