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LOC118365003 UTP--glucose-1-phosphate uridylyltransferase-like [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118365003, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118365003
Gene description
UTP--glucose-1-phosphate uridylyltransferase-like
See related
EnsemblRapid:ENSOKEG00005023891
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC118365003 in Genome Data Viewer
Location:
chromosome: 32
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 32 NC_068452.1 (9009870..9027557)

Chromosome 32 - NC_068452.1Genomic Context describing neighboring genes Neighboring gene homeobox protein OTX1 B-like Neighboring gene malate dehydrogenase, cytoplasmic-like Neighboring gene vacuolar protein sorting-associated protein 54-like Neighboring gene E3 ubiquitin-protein ligase pellino homolog 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068452.1 Chromosome 32 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UTP:glucose-1-phosphate uridylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycogen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UTP--glucose-1-phosphate uridylyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068452.1 Reference Oket_V2 Primary Assembly

    Range
    9009870..9027557
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035746884.2 → XP_035602777.1  UTP--glucose-1-phosphate uridylyltransferase-like isoform X2

    Related
    ENSOKEP00005039460.1, ENSOKET00005047390.1
    Conserved Domains (1) summary
    pfam01704
    Location:39 → 457
    UDPGP; UTP--glucose-1-phosphate uridylyltransferase

  2. XM_035746883.2 → XP_035602776.1  UTP--glucose-1-phosphate uridylyltransferase-like isoform X1

    Related
    ENSOKEP00005039430.1, ENSOKET00005047342.1
    Conserved Domains (1) summary
    pfam01704
    Location:50 → 468
    UDPGP; UTP--glucose-1-phosphate uridylyltransferase
Nucleotide Protein Strain
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Gene LinkOut

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