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LOC118364051 toll-like receptor 1 [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118364051, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118364051
Gene description
toll-like receptor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC118364051 in Genome Data Viewer
Location:
chromosome: 31
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 31 NC_068451.1 (11968521..11973333, complement)

Chromosome 31 - NC_068451.1Genomic Context describing neighboring genes Neighboring gene methyltransferase-like protein 25B Neighboring gene protein S100-A1 Neighboring gene semaphorin-7A-like Neighboring gene leucine rich repeat and Ig domain containing 4b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068451.1 Chromosome 31 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068451.1 Reference Oket_V2 Primary Assembly

    Range
    11968521..11973333 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052489590.1 → XP_052345550.1  toll-like receptor 1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases