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pnpla4 patatin-like phospholipase domain containing 4 [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118363732, updated on 18-Sep-2024

Summary

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Gene symbol
pnpla4
Gene description
patatin-like phospholipase domain containing 4
See related
EnsemblRapid:ENSOKEG00005036406
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See pnpla4 in Genome Data Viewer
Location:
chromosome: 30
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 30 NC_068450.1 (54134272..54137216)

Chromosome 30 - NC_068450.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118363133 Neighboring gene neuroligin 4 X-linked a Neighboring gene steryl-sulfatase-like Neighboring gene uncharacterized LOC118363737 Neighboring gene anosmin 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068450.1 Chromosome 30 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068450.1 Reference Oket_V2 Primary Assembly

    Range
    54134272..54137216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035744893.2 → XP_035600786.1  patatin-like phospholipase domain-containing protein 4

    Related
    ENSOKEP00005060205.1, ENSOKET00005073118.1
    Conserved Domains (1) summary
    cd07222
    Location:7 → 252
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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