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LOC118363629 C1GALT1-specific chaperone 1-like [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118363629, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118363629
Gene description
C1GALT1-specific chaperone 1-like
See related
EnsemblRapid:ENSOKEG00005010860
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC118363629 in Genome Data Viewer
Location:
chromosome: 30
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 30 NC_068450.1 (42595178..42598211)

Chromosome 30 - NC_068450.1Genomic Context describing neighboring genes Neighboring gene chloride intracellular channel protein 2-like Neighboring gene uncharacterized LOC127914008 Neighboring gene urotensin-related peptide 1 Neighboring gene cullin-4B-like Neighboring gene lysosomal-associated membrane protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068450.1 Chromosome 30 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068450.1 Reference Oket_V2 Primary Assembly

    Range
    42595178..42598211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035744687.2 → XP_035600580.1  C1GALT1-specific chaperone 1-like

    Related
    ENSOKEP00005018447.1, ENSOKET00005021435.1

  2. XM_052488460.1 → XP_052344420.1  C1GALT1-specific chaperone 1-like

    Related
    ENSOKEP00005018442.1, ENSOKET00005021429.1
Nucleotide Protein Strain
Heading Accession and Version

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