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LOC118360489 host cell factor 1-like [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118360489, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118360489
Gene description
host cell factor 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC118360489 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 28 NC_068448.1 (2727800..2807901)

Chromosome 28 - NC_068448.1Genomic Context describing neighboring genes Neighboring gene FYVE, RhoGEF and PH domain-containing protein 1-like Neighboring gene uncharacterized LOC118360650 Neighboring gene methyl CpG binding protein 2 Neighboring gene uncharacterized LOC127913091 Neighboring gene uncharacterized LOC127913090 Neighboring gene cyclin-dependent kinase 20 Neighboring gene uncharacterized LOC127913092 Neighboring gene histone deacetylase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068448.1 Chromosome 28 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: host cell factor 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068448.1 Reference Oket_V2 Primary Assembly

    Range
    2727800..2807901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052484400.1 → XP_052340360.1  LOW QUALITY PROTEIN: host cell factor 1-like

Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases