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washc4 WASH complex subunit 4 [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118359271, updated on 20-Mar-2024

Summary

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Gene symbol
washc4
Gene description
WASH complex subunit 4
See related
EnsemblRapid:ENSOKEG00005039302
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See washc4 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 26 NC_068446.1 (33562446..33584747, complement)

Chromosome 26 - NC_068446.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 10 Neighboring gene CCR4-NOT transcription complex, subunit 2 Neighboring gene solute carrier family 41 member 2a Neighboring gene uncharacterized LOC118359273 Neighboring gene nuclear transcription factor Y, beta b Neighboring gene small nucleolar RNA SNORD67

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068446.1 Chromosome 26 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068446.1 Reference Oket_V2 Primary Assembly

    Range
    33562446..33584747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035737713.2 → XP_035593606.1  WASH complex subunit 4

    Related
    ENSOKEP00005066269.1, ENSOKET00005080305.1
    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:32 → 598
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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